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當前位置 > 首頁 > 技術(shù)文章 > Octet國內(nèi)文獻盤點:小分子應用

Octet國內(nèi)文獻盤點:小分子應用

瀏覽次數(shù):760 發(fā)布日期:2024-8-14  來源:賽多利斯實驗室
Octet® 非標記分子互作分析系統(tǒng)采用實時的非標記分析技術(shù),用于測定親和力、動力學和抗體/蛋白質(zhì)定量。這種無流路的儀器平臺基于生物層干涉(BLI)技術(shù)而設計,與傳統(tǒng)的非標記技術(shù)相比,具有眾多優(yōu)勢。

2024年上半年(截至6月30日在線發(fā)表)的國內(nèi)論文中,使用賽多利斯Octet® 數(shù)據(jù)的國內(nèi)論文呈現(xiàn)井噴狀態(tài)。陳老師統(tǒng)計了2024年上半年約200篇國內(nèi)論文(預計總數(shù)超過200篇),這些文章分布于130個單位, 詳細列表在文末哦~老規(guī)矩,讓我們先按照單位和應用進行統(tǒng)計。
 

圖1. 2024上半年Octet® 文章第一作者單位分布
 

圖2. 2024H1 Octet® 文章應用分布
 
中國藥科大學、北京協(xié)和醫(yī)學院、南京大學、復旦大學、浙江大學和中山大學等單位發(fā)表的文章均在4篇以上。其中,中國藥科大學論文數(shù)達到了10篇。這表明,Octet® 因其操作簡單、成本低、數(shù)據(jù)準確和儀器穩(wěn)定性好等優(yōu)點,可以幫助科學家快速取得科研成果。

從應用方向上看,依舊涉及到多個方向。其中小分子的應用超過蛋白和抗體應用的文章數(shù)量,牢牢占據(jù)應用方向榜首!BLI技術(shù)對溶劑(DMSO)不敏感,假陽性低,高靈敏度等優(yōu)點可以幫助研究人更快,更高質(zhì)量的獲得了小分子檢測的結(jié)果。
圖片

今天,我們就來挑選幾篇代表性文章來一一解讀:


浙江大學——細胞與分子互作[1]
 
全球氣候變化伴隨著二氧化碳(CO2)富集和高溫(HT)脅迫。研究發(fā)現(xiàn),番茄外源質(zhì)外糖 (Glc)處理增強了番茄在環(huán)境CO2條件下對HT脅迫的恢復力;诩毎纳飳痈缮娣ǎ∣ctet® )、亞細胞定位和分裂熒光素酶測定表明,Glc 與番茄 G 蛋白信號轉(zhuǎn)導 1 (RGS1) 調(diào)節(jié)因子結(jié)合并誘導 RGS1 內(nèi)吞作用,從而以濃度依賴性方式誘導 RGS1-G 蛋白α亞基 (GPA1) 解離,這是 CO2-Glc 誘導的耐熱性升高所必需的。這些信息增強了對Glc-G蛋白信號傳導功能在應對全球氣候變化的脅迫恢復力中的理解,并將有助于開發(fā)植物恢復力的基因工程方法。
 

圖3. 將原生質(zhì)體固化在Octet® 傳感器上,結(jié)合各種單糖,發(fā)現(xiàn)表達RGS1的細胞主要結(jié)合葡萄糖,但是將RGS1突變后,與葡萄糖結(jié)合變?nèi)?br />  
Octet® 因為浸入即讀的方法,更適合檢測比較大的分析物,比較細胞。


西湖大學——血清抗體濃度測定[2]
 
第三劑滅活新型冠狀病毒疫苗的抗體反應對疫苗的保護作用至關(guān)重要。西湖大學工學院對接種疫苗的15人的九個月里七個時間點進行了微量取樣和靜脈穿刺取樣,并建立了基于Octet® 的光纖生物層干涉法測量(FO-BLI)來測試血清中的中和抗體,可以在幾分鐘內(nèi)完成測試。研究結(jié)果揭示發(fā)現(xiàn)在第三次給藥后,野生型變體的血清NAb水平在7天后增加了2.9倍,在一個月內(nèi)增加了3.3倍,隨后下降,并在三個月后變得不可檢測。針對原始株與變異株的中和能力檢測, FO-BLI與假病毒中和試驗高度相關(guān)(Pearson 相關(guān)系數(shù)為0.983)。基于FO-BLI的濃度測試因為其快速,并且與功能性匹配,有潛力在疾病預防和疫苗開發(fā)中有著更大的應用。
 

圖4. A圖:Octet® 建立血清中和抗體的檢測方法,將受體ACE2結(jié)合在傳感器上,與HRP偶聯(lián)的不同病毒株的RBD和血清的混合物孵育,然后用底物放大信號;B圖:這種方法測試的標準抗體的靈敏度可以達到20ng/mL;
 

D圖:FO-BLI的檢測結(jié)果與病毒中和實驗PVNT(IC50)有良好的相關(guān)性

使用生物層干涉技術(shù),可以快速建立濃度檢測方法。
 
 
浙江工業(yè)大學/北大醫(yī)學院——分子垂釣[3]

研究者建立了一種基于Octet® 的垂釣技術(shù),研究人員將GNAS蛋白固化至SA傳感器表面,再與中藥參芪降糖顆粒(SJG)提取物結(jié)合,隨后提取物被解離至洗脫液中,將洗脫液使用UHPLC-Q/TOF-MS/MS分析GNAS垂釣出的小分子。通過垂釣組與對照組的相對含量變化篩選26個小分子可能與GNAS有相互作用。其中7個化合物用Octet® 進一步驗證,并顯示出強的結(jié)合活性,均是SJG的主要成分。其中,黃芪中的Formononetin、高麗參的三七皂苷Ft1和人參皂苷中的甲素人參F2為“君“、地黃中的Catapol為“臣”,五味子中的五味子素A和茜草中的沒食子酸為“佐使”,符合中醫(yī)配伍“君臣佐使“原則。
 

圖5. Octet® 驗證小分子和GNAS的結(jié)合
 
非流路設計可以多次垂釣富集豐度低結(jié)合弱的小分子,提高垂釣的成功率。


中國醫(yī)學科學院基礎(chǔ)醫(yī)學研究所——脂肪肝新靶點[4]
 
肝細胞對預防非酒精性脂肪性肝病(NAFLD)和其他慢性代謝性疾病具有重要意義。中國醫(yī)學科學院基礎(chǔ)醫(yī)學研究所黃波團隊研究發(fā)現(xiàn),糖原合成使用其中間代謝物尿苷二磷酸葡萄糖(UDPG)來拮抗脂肪生成,從而引導小鼠和人肝細胞將葡萄糖碳儲存為糖原。在這項機制研究中,發(fā)現(xiàn)UDPG通過SLC35F5轉(zhuǎn)運進入高爾基體后,誘導site-1蛋白酶S1P的泛素化降解,從而阻斷活性形式SREBP1c的生成,最終抑制脂肪酸的合成。通過Octet® 非標記分子互作系統(tǒng)對小鼠和人的脂肪酸合成過程中關(guān)鍵酶(S1P)與UDPG結(jié)合這一重要步驟進行了驗證,并提供了結(jié)合的直觀證據(jù)。
 

圖6. 通過SA傳感器固化小鼠(a)和人(b)的S1P蛋白分別與不同濃度UDPG結(jié)合解離曲線

原文大量pulldown以及CO-IP數(shù)據(jù),但作者仍選擇用Octet® 非標記互作系統(tǒng)來證明S1P與UDPG直接相互作用,可見Direct Binding是趨勢。
 
 
Octet® 分子互作分析系統(tǒng)的優(yōu)勢在于
  • 非標記Direct Binding是趨勢,結(jié)果更準確
  • 快速測定親和力,更加定量化地表征分子互作
  • 無洗滌步驟,可測弱親和力(解離快)
  • 寫入了美國藥典,文章多,認可度廣
  • 萬金油技術(shù),可以用與檢測DNA,小分子,蛋白質(zhì)等各種生物分子
  • 多種實驗方案,除了直接測試,還有競爭法,垂釣等
  • 操作簡便,耗材及維護成本低
Octet® 讓分子互作不再復雜!祝愿大家可以用賽多利斯神器發(fā)好文章!
 
《生物層干涉技術(shù)小分子應用文集》
  
《生物層干涉技術(shù)小分子應用文集》詳細介紹了生物層干涉(BLI)技術(shù)的原理,及其在小分子領(lǐng)域的多個應用場景,并對BLI技術(shù)應用于小分子研究的20余篇代表性文獻進行了整理匯總:內(nèi)容涵蓋從防御機制到垂釣驗證,再到小分子篩選、表征、優(yōu)化等多個方面,全展示了BLI技術(shù)在小分子研究中的強大潛力和實踐成果。
  
 
-參考文獻-
[1] Glucose-G protein signaling plays a crucial role in tomato resilience to high temperature and elevated CO2 | Plant Physiology | Oxford Academic (oup.com)
[2] Vaccines | Free Full-Text | Dynamic Profiling and Prediction of Antibody Response to SARS-CoV-2 Booster-Inactivated Vaccines by Microsample-Driven Biosensor and Machine Learning (mdpi.com)
[3] Zhang H, et al. Discovery of drug targets based on traditional Chinese medicine microspheres (TCM-MPs) fishing strategy combined with bio-layer interferometry (BLI) technology. Anal Chim Acta. 2024 May 29;1305:342542.
[4] Hepatic glycogenesis antagonizes lipogenesis by blocking S1P via UDPG.Science,2024

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